Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 AP005117.1-202ENST00000581724 1908 ntBASIC14.35□□□□□ -0.11
CSF1P09603 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.35□□□□□ -0.11
CSF1P09603 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.35□□□□□ -0.11
CSF1P09603 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 AL662844.1-201ENST00000546340 181 ntBASIC14.35□□□□□ -0.11
CSF1P09603 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 AC074051.2-201ENST00000565115 352 ntBASIC14.35□□□□□ -0.11
CSF1P09603 RNF126P1-202ENST00000569893 925 ntBASIC14.35□□□□□ -0.11
CSF1P09603 GPR32P1-201ENST00000601788 811 ntBASIC14.35□□□□□ -0.11
CSF1P09603 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 AL139011.1-202ENST00000642063 584 ntBASIC14.35□□□□□ -0.11
CSF1P09603 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
CSF1P09603 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.34□□□□□ -0.11
CSF1P09603 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.34□□□□□ -0.11
CSF1P09603 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 Z69720.1-201ENST00000601483 472 ntBASIC14.34□□□□□ -0.11
CSF1P09603 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.34□□□□□ -0.11
CSF1P09603 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CSF1P09603 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 AC073347.1-201ENST00000421633 2643 ntBASIC14.34□□□□□ -0.11
CSF1P09603 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.34□□□□□ -0.11
CSF1P09603 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSF1P09603 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.34□□□□□ -0.11
CSF1P09603 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.33□□□□□ -0.11
CSF1P09603 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.33□□□□□ -0.11
CSF1P09603 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSF1P09603 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.33□□□□□ -0.11
CSF1P09603 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CSF1P09603 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CSF1P09603 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CSF1P09603 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.33□□□□□ -0.11
CSF1P09603 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSF1P09603 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSF1P09603 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSF1P09603 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.33□□□□□ -0.12
CSF1P09603 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSF1P09603 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.33□□□□□ -0.12
CSF1P09603 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSF1P09603 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSF1P09603 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSF1P09603 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms