Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 Z92544.3-201ENST00000624747 417 ntBASIC16.8■□□□□ 0.28
CLDN11O75508 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN11O75508 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN11O75508 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLDN11O75508 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN11O75508 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN11O75508 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN11O75508 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN11O75508 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN11O75508 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CLDN11O75508 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN11O75508 ALOX12P2-203ENST00000570921 1945 ntBASIC16.79■□□□□ 0.28
CLDN11O75508 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CLDN11O75508 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CLDN11O75508 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.79■□□□□ 0.28
CLDN11O75508 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.79■□□□□ 0.28
CLDN11O75508 AC067863.1-201ENST00000494933 530 ntBASIC16.79■□□□□ 0.28
CLDN11O75508 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.79■□□□□ 0.28
CLDN11O75508 RNA5SP410-201ENST00000516285 106 ntBASIC16.79■□□□□ 0.28
CLDN11O75508 AC018529.1-201ENST00000613063 361 ntBASIC16.79■□□□□ 0.28
CLDN11O75508 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN11O75508 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CLDN11O75508 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN11O75508 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN11O75508 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN11O75508 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN11O75508 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDN11O75508 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CLDN11O75508 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN11O75508 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 FAM86GP-201ENST00000448322 971 ntBASIC16.78■□□□□ 0.28
CLDN11O75508 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN11O75508 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.78■□□□□ 0.28
CLDN11O75508 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN11O75508 RFPL4AP1-201ENST00000530883 850 ntBASIC16.78■□□□□ 0.28
CLDN11O75508 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN11O75508 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 MIR6080-201ENST00000617359 66 ntBASIC16.78■□□□□ 0.28
CLDN11O75508 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLDN11O75508 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CLDN11O75508 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN11O75508 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN11O75508 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.78■□□□□ 0.28
CLDN11O75508 AC009053.2-201ENST00000563701 2365 ntBASIC16.78■□□□□ 0.28
CLDN11O75508 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN11O75508 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.77■□□□□ 0.28
CLDN11O75508 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN11O75508 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CLDN11O75508 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.77■□□□□ 0.28
CLDN11O75508 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN11O75508 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.77■□□□□ 0.28
CLDN11O75508 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLDN11O75508 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms