Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 C1QBPP1-201ENST00000400117 770 ntBASIC7.22□□□□□ -1.25
USH2AO75445 CD8B2-202ENST00000417670 633 ntBASIC7.22□□□□□ -1.25
USH2AO75445 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 MIR4492-201ENST00000581627 80 ntBASIC7.22□□□□□ -1.25
USH2AO75445 FHL2-212ENST00000607522 759 ntTSL 2 BASIC7.22□□□□□ -1.25
USH2AO75445 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
USH2AO75445 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
USH2AO75445 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
USH2AO75445 REXO1L8P-201ENST00000604378 1897 ntBASIC7.21□□□□□ -1.25
USH2AO75445 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
USH2AO75445 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
USH2AO75445 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
USH2AO75445 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 AL512430.1-201ENST00000392575 860 ntBASIC7.21□□□□□ -1.25
USH2AO75445 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC7.21□□□□□ -1.25
USH2AO75445 TARDBPP1-201ENST00000442013 1203 ntBASIC7.21□□□□□ -1.25
USH2AO75445 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
USH2AO75445 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC7.21□□□□□ -1.25
USH2AO75445 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
USH2AO75445 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
USH2AO75445 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
USH2AO75445 AL589702.1-201ENST00000641229 1509 ntBASIC7.21□□□□□ -1.25
USH2AO75445 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
USH2AO75445 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
USH2AO75445 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC7.21□□□□□ -1.25
USH2AO75445 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 ACTG1P2-201ENST00000415776 1125 ntBASIC7.21□□□□□ -1.26
USH2AO75445 ACTG1P11-201ENST00000425411 1125 ntBASIC7.21□□□□□ -1.26
USH2AO75445 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC7.21□□□□□ -1.26
USH2AO75445 AC243562.2-201ENST00000561247 970 ntBASIC7.21□□□□□ -1.26
USH2AO75445 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC7.21□□□□□ -1.26
USH2AO75445 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC7.21□□□□□ -1.26
USH2AO75445 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 FRMD8P1-201ENST00000440433 1524 ntBASIC7.21□□□□□ -1.26
USH2AO75445 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC7.21□□□□□ -1.26
USH2AO75445 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC7.21□□□□□ -1.26
USH2AO75445 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
USH2AO75445 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC7.21□□□□□ -1.26
USH2AO75445 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 AC005702.4-201ENST00000618393 416 ntBASIC7.21□□□□□ -1.26
USH2AO75445 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC7.21□□□□□ -1.26
USH2AO75445 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC7.21□□□□□ -1.26
USH2AO75445 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC7.21□□□□□ -1.26
USH2AO75445 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC7.21□□□□□ -1.26
USH2AO75445 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC7.21□□□□□ -1.26
USH2AO75445 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC7.21□□□□□ -1.26
USH2AO75445 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC7.21□□□□□ -1.26
USH2AO75445 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC7.21□□□□□ -1.26
USH2AO75445 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC7.21□□□□□ -1.26
USH2AO75445 AC138649.2-201ENST00000615886 705 ntBASIC7.21□□□□□ -1.26
USH2AO75445 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USH2AO75445 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms