Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PFDN1O60925 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PFDN1O60925 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PFDN1O60925 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
PFDN1O60925 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PFDN1O60925 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 AC091951.1-201ENST00000512854 2465 ntBASIC14.72□□□□□ -0.05
PFDN1O60925 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.72□□□□□ -0.05
PFDN1O60925 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.72□□□□□ -0.05
PFDN1O60925 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 AC027612.3-201ENST00000413684 1047 ntBASIC14.72□□□□□ -0.05
PFDN1O60925 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.72□□□□□ -0.05
PFDN1O60925 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.72□□□□□ -0.05
PFDN1O60925 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.72□□□□□ -0.05
PFDN1O60925 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.72□□□□□ -0.05
PFDN1O60925 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.72□□□□□ -0.05
PFDN1O60925 AL121906.2-201ENST00000621597 723 ntBASIC14.72□□□□□ -0.05
PFDN1O60925 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 AC136759.1-202ENST00000530858 2194 ntBASIC14.72□□□□□ -0.05
PFDN1O60925 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PFDN1O60925 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PFDN1O60925 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PFDN1O60925 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.72□□□□□ -0.05
PFDN1O60925 PPT1-213ENST00000641319 2388 ntBASIC14.71□□□□□ -0.05
PFDN1O60925 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.71□□□□□ -0.05
PFDN1O60925 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC14.71□□□□□ -0.05
PFDN1O60925 AL109659.2-201ENST00000606809 1674 ntBASIC14.71□□□□□ -0.05
PFDN1O60925 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PFDN1O60925 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
PFDN1O60925 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PFDN1O60925 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PFDN1O60925 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.71□□□□□ -0.05
PFDN1O60925 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.71□□□□□ -0.05
PFDN1O60925 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.71□□□□□ -0.05
PFDN1O60925 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms