Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.74■□□□□ 0.11
DUX1O43812 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX1O43812 AP001094.4-201ENST00000579008 2176 ntBASIC15.74■□□□□ 0.11
DUX1O43812 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
DUX1O43812 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
DUX1O43812 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX1O43812 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.74■□□□□ 0.11
DUX1O43812 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
DUX1O43812 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 AC005915.1-201ENST00000624912 2018 ntBASIC15.73■□□□□ 0.11
DUX1O43812 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 AC087499.5-201ENST00000452760 1342 ntBASIC15.73■□□□□ 0.11
DUX1O43812 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX1O43812 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX1O43812 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 MRPS18AP1-201ENST00000414458 589 ntBASIC15.73■□□□□ 0.11
DUX1O43812 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX1O43812 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.73■□□□□ 0.11
DUX1O43812 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.73■□□□□ 0.11
DUX1O43812 SERBP1P5-201ENST00000510079 1181 ntBASIC15.73■□□□□ 0.11
DUX1O43812 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.73■□□□□ 0.11
DUX1O43812 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 BANF1P1-201ENST00000553684 263 ntBASIC15.73■□□□□ 0.11
DUX1O43812 AL079307.3-201ENST00000556114 283 ntBASIC15.73■□□□□ 0.11
DUX1O43812 AC005225.4-201ENST00000557330 545 ntBASIC15.73■□□□□ 0.11
DUX1O43812 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
DUX1O43812 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.73■□□□□ 0.11
DUX1O43812 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX1O43812 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.73■□□□□ 0.11
DUX1O43812 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
DUX1O43812 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
DUX1O43812 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
DUX1O43812 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
DUX1O43812 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
DUX1O43812 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.72■□□□□ 0.11
DUX1O43812 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
DUX1O43812 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.72■□□□□ 0.11
DUX1O43812 RPL37AP1-201ENST00000412502 279 ntBASIC15.72■□□□□ 0.11
DUX1O43812 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.72■□□□□ 0.11
DUX1O43812 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.72■□□□□ 0.11
DUX1O43812 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.72■□□□□ 0.11
DUX1O43812 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.72■□□□□ 0.11
DUX1O43812 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.72■□□□□ 0.11
DUX1O43812 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.72■□□□□ 0.11
DUX1O43812 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.72■□□□□ 0.11
DUX1O43812 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
DUX1O43812 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 AC105020.1-201ENST00000435356 2205 ntBASIC15.72■□□□□ 0.11
DUX1O43812 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
DUX1O43812 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms