Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYRM1O43325 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.23□□□□□ -0.13
LYRM1O43325 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
LYRM1O43325 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYRM1O43325 KRT8P49-201ENST00000604166 1432 ntBASIC14.23□□□□□ -0.13
LYRM1O43325 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYRM1O43325 AC087481.3-201ENST00000602886 1894 ntBASIC14.23□□□□□ -0.13
LYRM1O43325 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LYRM1O43325 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.23□□□□□ -0.13
LYRM1O43325 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LYRM1O43325 AC092919.2-201ENST00000623631 1645 ntBASIC14.23□□□□□ -0.13
LYRM1O43325 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.22□□□□□ -0.13
LYRM1O43325 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.22□□□□□ -0.13
LYRM1O43325 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LYRM1O43325 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.22□□□□□ -0.13
LYRM1O43325 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 LINC00552-201ENST00000625151 2579 ntBASIC14.22□□□□□ -0.13
LYRM1O43325 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.22□□□□□ -0.13
LYRM1O43325 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LYRM1O43325 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.22□□□□□ -0.13
LYRM1O43325 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.22□□□□□ -0.13
LYRM1O43325 AC103564.2-201ENST00000432853 1299 ntBASIC14.22□□□□□ -0.13
LYRM1O43325 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 STK19B-204ENST00000512515 211 ntBASIC14.22□□□□□ -0.13
LYRM1O43325 C1QBPP2-201ENST00000528754 825 ntBASIC14.22□□□□□ -0.13
LYRM1O43325 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.22□□□□□ -0.13
LYRM1O43325 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.22□□□□□ -0.13
LYRM1O43325 MIR5787-201ENST00000611784 55 ntBASIC14.22□□□□□ -0.13
LYRM1O43325 AC073912.3-201ENST00000624414 853 ntBASIC14.22□□□□□ -0.13
LYRM1O43325 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LYRM1O43325 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 AL031731.1-201ENST00000642131 2094 ntBASIC14.22□□□□□ -0.13
LYRM1O43325 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LYRM1O43325 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.22□□□□□ -0.13
LYRM1O43325 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.22□□□□□ -0.13
LYRM1O43325 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LYRM1O43325 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
LYRM1O43325 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LYRM1O43325 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
LYRM1O43325 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.21□□□□□ -0.13
LYRM1O43325 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.21□□□□□ -0.13
LYRM1O43325 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.21□□□□□ -0.13
LYRM1O43325 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.21□□□□□ -0.13
LYRM1O43325 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 AC122714.2-201ENST00000502787 707 ntBASIC14.21□□□□□ -0.13
LYRM1O43325 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.21□□□□□ -0.13
LYRM1O43325 NEK4P2-201ENST00000580004 1012 ntBASIC14.21□□□□□ -0.13
LYRM1O43325 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LYRM1O43325 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.21□□□□□ -0.13
LYRM1O43325 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.21□□□□□ -0.13
LYRM1O43325 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
LYRM1O43325 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYRM1O43325 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYRM1O43325 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.21□□□□□ -0.14
LYRM1O43325 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LYRM1O43325 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYRM1O43325 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LYRM1O43325 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYRM1O43325 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.21□□□□□ -0.14
LYRM1O43325 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LYRM1O43325 CICP14-201ENST00000629111 2732 ntBASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms