Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.19■□□□□ 0.34
CCDC188H7C350 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC188H7C350 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC188H7C350 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC188H7C350 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC188H7C350 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC188H7C350 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC188H7C350 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC188H7C350 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC188H7C350 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC188H7C350 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC188H7C350 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 NUS1P2-201ENST00000417358 873 ntBASIC17.18■□□□□ 0.34
CCDC188H7C350 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.18■□□□□ 0.34
CCDC188H7C350 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC188H7C350 AC106795.1-205ENST00000512851 1056 ntBASIC17.18■□□□□ 0.34
CCDC188H7C350 AP000867.3-201ENST00000524675 377 ntBASIC17.18■□□□□ 0.34
CCDC188H7C350 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.18■□□□□ 0.34
CCDC188H7C350 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC188H7C350 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC188H7C350 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CCDC188H7C350 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC188H7C350 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
CCDC188H7C350 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCDC188H7C350 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC188H7C350 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC188H7C350 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.17■□□□□ 0.34
CCDC188H7C350 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC188H7C350 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC188H7C350 MIR3180-1-201ENST00000580374 94 ntBASIC17.17■□□□□ 0.34
CCDC188H7C350 MIR3180-3-201ENST00000584616 94 ntBASIC17.17■□□□□ 0.34
CCDC188H7C350 NKAPP1-205ENST00000585790 367 ntBASIC17.17■□□□□ 0.34
CCDC188H7C350 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC188H7C350 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC188H7C350 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC188H7C350 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC188H7C350 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC188H7C350 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC188H7C350 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC188H7C350 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC188H7C350 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
CCDC188H7C350 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC188H7C350 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC188H7C350 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC188H7C350 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC188H7C350 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCDC188H7C350 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC188H7C350 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC188H7C350 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.16■□□□□ 0.34
CCDC188H7C350 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CCDC188H7C350 HCG4-201ENST00000418983 998 ntBASIC17.16■□□□□ 0.34
CCDC188H7C350 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC188H7C350 SLC25A6P2-201ENST00000497974 877 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms