Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.98■□□□□ 0.63
PALM3A6NDB9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PALM3A6NDB9 U82695.1-201ENST00000635752 1889 ntBASIC18.98■□□□□ 0.63
PALM3A6NDB9 AL592424.1-201ENST00000563624 1536 ntBASIC18.98■□□□□ 0.63
PALM3A6NDB9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PALM3A6NDB9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PALM3A6NDB9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.98■□□□□ 0.63
PALM3A6NDB9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PALM3A6NDB9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PALM3A6NDB9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 SPDYE7P-202ENST00000420373 878 ntBASIC18.97■□□□□ 0.63
PALM3A6NDB9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.97■□□□□ 0.63
PALM3A6NDB9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PALM3A6NDB9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 MIR4453-201ENST00000584019 89 ntBASIC18.96■□□□□ 0.63
PALM3A6NDB9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 REXO1L8P-201ENST00000604378 1897 ntBASIC18.96■□□□□ 0.63
PALM3A6NDB9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PALM3A6NDB9 TUBB3P1-201ENST00000405796 1332 ntBASIC18.96■□□□□ 0.63
PALM3A6NDB9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
PALM3A6NDB9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 CNN2P2-201ENST00000443536 909 ntBASIC18.95■□□□□ 0.62
PALM3A6NDB9 CNN2P3-201ENST00000450201 906 ntBASIC18.95■□□□□ 0.62
PALM3A6NDB9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 RNA5SP410-201ENST00000516285 106 ntBASIC18.95■□□□□ 0.62
PALM3A6NDB9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 MIR6080-201ENST00000617359 66 ntBASIC18.95■□□□□ 0.62
PALM3A6NDB9 AL136317.3-201ENST00000618497 906 ntBASIC18.95■□□□□ 0.62
PALM3A6NDB9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms