Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AC112504.1-201ENST00000623415 1841 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AC004817.3-201ENST00000602957 2129 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 TP73-AS1-210ENST00000637775 1455 ntBASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 PCDHA3-202ENST00000532566 4594 ntBASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AC091607.1-201ENST00000490318 1060 ntBASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 AC083849.1-201ENST00000615227 514 ntBASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 TMEM191A-211ENST00000637163 1067 ntBASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 LINC02228-204ENST00000642115 2962 ntBASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV18A0A075B6X5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 AC099063.4-201ENST00000641099 1602 ntBASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 AK4P3-201ENST00000418260 669 ntBASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TRAV18A0A075B6X5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms