Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 MST1L-201ENST00000442552 2185 ntBASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 AC108073.2-201ENST00000464002 357 ntBASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 AC040169.1-201ENST00000565382 521 ntBASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 AL589182.2-201ENST00000619332 1049 ntBASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 ALOX12P2-203ENST00000570921 1945 ntBASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX49Q9Y6V7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
DDX49Q9Y6V7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
DDX49Q9Y6V7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
DDX49Q9Y6V7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX49Q9Y6V7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 AC092850.2-201ENST00000623821 2697 ntBASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX49Q9Y6V7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms