Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AC024909.3-201ENST00000611513 2257 ntBASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA11Q9Y5H2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 MIR4515-201ENST00000584082 81 ntBASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC25A6P4-201ENST00000586535 553 ntBASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA11Q9Y5H2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 GGT4P-201ENST00000623672 1708 ntBASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 CRYGEP-201ENST00000412192 528 ntBASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 VN2R19P-201ENST00000442399 1052 ntBASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 UNC93B6-202ENST00000528242 690 ntBASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 ACTL9-202ENST00000612068 1252 ntBASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 AL365203.3-201ENST00000609742 2057 ntBASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA11Q9Y5H2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms