Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 AC093520.2-201ENST00000561830 333 ntBASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 MIR3909-201ENST00000579518 119 ntBASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 AL390955.2-201ENST00000603032 514 ntBASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 GPAA1P2-202ENST00000606848 1787 ntBASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 HMGA1P7-201ENST00000406908 502 ntBASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 ADH5P3-201ENST00000433842 1137 ntBASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 AC069262.1-201ENST00000539058 672 ntBASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 AC020765.3-201ENST00000613051 740 ntBASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 PCDHB19P-201ENST00000570871 2371 ntBASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHB1Q9Y5F3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 RNU1-129P-201ENST00000384064 167 ntBASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 AC112191.1-201ENST00000523689 701 ntBASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 DUX4L27-201ENST00000554796 1261 ntBASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 U1.21-201ENST00000580816 167 ntBASIC16.48■□□□□ 0.23
PCDHB1Q9Y5F3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms