Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HHLA3Q9XRX5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HHLA3Q9XRX5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.15□□□□□ -0.47
HHLA3Q9XRX5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.15□□□□□ -0.47
HHLA3Q9XRX5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
HHLA3Q9XRX5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HHLA3Q9XRX5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
HHLA3Q9XRX5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AL589182.2-201ENST00000619332 1049 ntBASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AC073347.1-201ENST00000421633 2643 ntBASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.14□□□□□ -0.47
HHLA3Q9XRX5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 FGFR3P6-201ENST00000457012 610 ntBASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 AC124947.2-201ENST00000547118 1133 ntBASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 MTDHP4-201ENST00000600287 670 ntBASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms