Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NCDNQ9UBB6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 ANKRD19P-201ENST00000338192 862 ntBASIC16.33■□□□□ 0.2
NCDNQ9UBB6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 AC114501.2-201ENST00000439631 535 ntBASIC16.33■□□□□ 0.2
NCDNQ9UBB6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 AL133215.2-201ENST00000609242 977 ntBASIC16.33■□□□□ 0.2
NCDNQ9UBB6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NCDNQ9UBB6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.32■□□□□ 0.2
NCDNQ9UBB6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 FOXO1B-201ENST00000504678 1527 ntBASIC16.32■□□□□ 0.2
NCDNQ9UBB6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 AL583810.1-201ENST00000553344 1045 ntBASIC16.32■□□□□ 0.2
NCDNQ9UBB6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NCDNQ9UBB6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 KRT18P55-202ENST00000578578 1546 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 272.7 ms