Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.15■□□□□ 0.02
LRFN1Q9P244 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.15■□□□□ 0.02
LRFN1Q9P244 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LRFN1Q9P244 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.15■□□□□ 0.02
LRFN1Q9P244 AP3S2-216ENST00000617003 1561 ntBASIC15.15■□□□□ 0.02
LRFN1Q9P244 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRFN1Q9P244 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 TREML5P-201ENST00000421694 576 ntBASIC15.14■□□□□ 0.01
LRFN1Q9P244 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AC069120.2-201ENST00000524091 540 ntBASIC15.14■□□□□ 0.01
LRFN1Q9P244 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 MIR4453-201ENST00000584019 89 ntBASIC15.14■□□□□ 0.01
LRFN1Q9P244 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AC018529.1-201ENST00000613063 361 ntBASIC15.14■□□□□ 0.01
LRFN1Q9P244 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 AC099398.1-201ENST00000567919 2776 ntBASIC15.14■□□□□ 0.01
LRFN1Q9P244 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.14■□□□□ 0.01
LRFN1Q9P244 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LRFN1Q9P244 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 FO538757.1-201ENST00000623083 1397 ntBASIC15.13■□□□□ 0.01
LRFN1Q9P244 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.13■□□□□ 0.01
LRFN1Q9P244 INGX-202ENST00000489074 768 ntBASIC15.13■□□□□ 0.01
LRFN1Q9P244 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 AC003101.2-201ENST00000612557 442 ntBASIC15.13■□□□□ 0.01
LRFN1Q9P244 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.13■□□□□ 0.01
LRFN1Q9P244 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LRFN1Q9P244 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LRFN1Q9P244 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRFN1Q9P244 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.12■□□□□ 0.01
LRFN1Q9P244 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms