Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMG20BQ9P0W2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 AC067863.1-201ENST00000494933 530 ntBASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 RARRES2P9-201ENST00000565168 469 ntBASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HMG20BQ9P0W2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 UBALD1-205ENST00000590891 2641 ntBASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 MIR6080-201ENST00000617359 66 ntBASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
HMG20BQ9P0W2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 SPDYE7P-202ENST00000420373 878 ntBASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 KLF2P3-201ENST00000451977 1087 ntBASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 MIR4453-201ENST00000584019 89 ntBASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms