Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 AD001527.2-201ENST00000622994 785 ntBASIC16.06■□□□□ 0.16
NDE1Q9NXR1 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.06■□□□□ 0.16
NDE1Q9NXR1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.06■□□□□ 0.16
NDE1Q9NXR1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 AC073592.5-201ENST00000624854 528 ntBASIC16.05■□□□□ 0.16
NDE1Q9NXR1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDE1Q9NXR1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 PRAL-201ENST00000624952 3286 ntBASIC16.04■□□□□ 0.16
NDE1Q9NXR1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 HBZP1-201ENST00000354915 429 ntBASIC16.04■□□□□ 0.16
NDE1Q9NXR1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 TSPY20P-201ENST00000450910 630 ntBASIC16.04■□□□□ 0.16
NDE1Q9NXR1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 AC009533.2-201ENST00000543664 586 ntBASIC16.04■□□□□ 0.16
NDE1Q9NXR1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.04■□□□□ 0.16
NDE1Q9NXR1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 SNX18-202ENST00000343017 3140 ntBASIC16.04■□□□□ 0.16
NDE1Q9NXR1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 OR2I1P-210ENST00000642037 4691 ntBASIC16.04■□□□□ 0.16
NDE1Q9NXR1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDE1Q9NXR1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms