Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 MTND6P24-201ENST00000440466 518 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 SERBP1P5-201ENST00000510079 1181 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 ZNF890P-202ENST00000530367 1156 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.76■□□□□ 0.75
SALL1Q9NSC2 AC009118.2-201ENST00000613275 655 ntBASIC19.76■□□□□ 0.75
SALL1Q9NSC2 PCGF3-213ENST00000620529 1899 ntBASIC19.75■□□□□ 0.75
SALL1Q9NSC2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 UBALD1-205ENST00000590891 2641 ntBASIC19.75■□□□□ 0.75
SALL1Q9NSC2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 AC009407.1-201ENST00000568958 598 ntBASIC19.75■□□□□ 0.75
SALL1Q9NSC2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
SALL1Q9NSC2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SALL1Q9NSC2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 LINC01144-201ENST00000626198 1710 ntBASIC19.73■□□□□ 0.75
SALL1Q9NSC2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 AC015922.1-201ENST00000421102 1152 ntBASIC19.73■□□□□ 0.75
SALL1Q9NSC2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms