Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 AC073592.4-201ENST00000623827 446 ntBASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCDHB16Q9NRJ7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 AC092384.3-202ENST00000564646 2873 ntBASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 HLA-A-202ENST00000376806 1854 ntBASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCDHB16Q9NRJ7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 AL009178.2-201ENST00000597278 2719 ntBASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 PRYP5-201ENST00000451909 266 ntBASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 AC006538.1-201ENST00000567905 1585 ntBASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCDHB16Q9NRJ7 AC079776.2-201ENST00000641154 1609 ntBASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 AL645728.1-201ENST00000366221 2101 ntBASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 KRT16P4-201ENST00000453883 522 ntBASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCDHB16Q9NRJ7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms