Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.44■□□□□ 0.38
CD248Q9HCU0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.44■□□□□ 0.38
CD248Q9HCU0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.44■□□□□ 0.38
CD248Q9HCU0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CD248Q9HCU0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.44■□□□□ 0.38
CD248Q9HCU0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.44■□□□□ 0.38
CD248Q9HCU0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
CD248Q9HCU0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD248Q9HCU0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CD248Q9HCU0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 AL513523.2-202ENST00000427283 2040 ntBASIC17.43■□□□□ 0.38
CD248Q9HCU0 AC092068.3-201ENST00000587894 2016 ntBASIC17.43■□□□□ 0.38
CD248Q9HCU0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 CNN2P11-201ENST00000429351 262 ntBASIC17.43■□□□□ 0.38
CD248Q9HCU0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 PAWRP1-201ENST00000451083 565 ntBASIC17.43■□□□□ 0.38
CD248Q9HCU0 RFPL4AP1-201ENST00000530883 850 ntBASIC17.43■□□□□ 0.38
CD248Q9HCU0 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 SNHG9-202ENST00000564014 471 ntBASIC17.43■□□□□ 0.38
CD248Q9HCU0 AC027612.4-201ENST00000605371 583 ntBASIC17.43■□□□□ 0.38
CD248Q9HCU0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.43■□□□□ 0.38
CD248Q9HCU0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CD248Q9HCU0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 AL135999.2-201ENST00000622438 1686 ntBASIC17.42■□□□□ 0.38
CD248Q9HCU0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.42■□□□□ 0.38
CD248Q9HCU0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 CEND1P1-201ENST00000451006 455 ntBASIC17.42■□□□□ 0.38
CD248Q9HCU0 AC074386.1-202ENST00000463561 864 ntBASIC17.42■□□□□ 0.38
CD248Q9HCU0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CD248Q9HCU0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CD248Q9HCU0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms