Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAF4Q9BUZ4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAF4Q9BUZ4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAF4Q9BUZ4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAF4Q9BUZ4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAF4Q9BUZ4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAF4Q9BUZ4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAF4Q9BUZ4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.03
TRAF4Q9BUZ4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 HCG4B-203ENST00000450128 991 ntBASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AL353135.1-201ENST00000606729 504 ntBASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AC004790.2-201ENST00000623588 572 ntBASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AC134684.3-201ENST00000641758 218 ntBASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAF4Q9BUZ4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 AC144831.1-201ENST00000573312 2656 ntBASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 LINC00982-205ENST00000420957 435 ntBASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRAF4Q9BUZ4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms