Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
LITAFQ99732 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11□□□□□ -0.65
LITAFQ99732 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 AC008677.1-201ENST00000519230 1561 ntBASIC11□□□□□ -0.65
LITAFQ99732 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC11□□□□□ -0.65
LITAFQ99732 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11□□□□□ -0.65
LITAFQ99732 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11□□□□□ -0.65
LITAFQ99732 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11□□□□□ -0.65
LITAFQ99732 KRT18P6-201ENST00000555540 1265 ntBASIC11□□□□□ -0.65
LITAFQ99732 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC11□□□□□ -0.65
LITAFQ99732 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
LITAFQ99732 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11□□□□□ -0.65
LITAFQ99732 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 AC005840.4-201ENST00000541242 2494 ntBASIC11□□□□□ -0.65
LITAFQ99732 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11□□□□□ -0.65
LITAFQ99732 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11□□□□□ -0.65
LITAFQ99732 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 AC112693.3-201ENST00000624819 1983 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 AC041040.2-201ENST00000622926 2899 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC10.99□□□□□ -0.65
LITAFQ99732 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LITAFQ99732 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
LITAFQ99732 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
LITAFQ99732 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 MIR662-201ENST00000384847 95 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 MIR1238-201ENST00000408483 83 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 HMGA1P5-201ENST00000412453 271 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
LITAFQ99732 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LITAFQ99732 ZNF444P1-201ENST00000559497 298 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC10.99□□□□□ -0.65
LITAFQ99732 AL390719.2-201ENST00000606993 987 ntBASIC10.99□□□□□ -0.65
LITAFQ99732 AD001527.2-201ENST00000622994 785 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms