Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 GPS2P2-201ENST00000430745 888 ntBASIC15.3■□□□□ 0.04
SCMH1Q96GD3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 AC011467.4-201ENST00000594891 528 ntBASIC15.3■□□□□ 0.04
SCMH1Q96GD3 LINC02084-201ENST00000606069 1096 ntBASIC15.3■□□□□ 0.04
SCMH1Q96GD3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 AP001059.3-201ENST00000619053 235 ntBASIC15.3■□□□□ 0.04
SCMH1Q96GD3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCMH1Q96GD3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 AC092850.2-201ENST00000623821 2697 ntBASIC15.29■□□□□ 0.04
SCMH1Q96GD3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 AC124947.2-201ENST00000547118 1133 ntBASIC15.29■□□□□ 0.04
SCMH1Q96GD3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 MIR4492-201ENST00000581627 80 ntBASIC15.29■□□□□ 0.04
SCMH1Q96GD3 MIR3197-201ENST00000582241 73 ntBASIC15.29■□□□□ 0.04
SCMH1Q96GD3 Z92544.3-201ENST00000624747 417 ntBASIC15.29■□□□□ 0.04
SCMH1Q96GD3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCMH1Q96GD3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 AC022188.1-201ENST00000620960 1664 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 AC007950.2-201ENST00000615045 2347 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CNN2P2-201ENST00000443536 909 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CNN2P3-201ENST00000450201 906 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 SPCS2P1-201ENST00000561636 679 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 AL136317.3-201ENST00000618497 906 ntBASIC15.28■□□□□ 0.04
SCMH1Q96GD3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCMH1Q96GD3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms