Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.42■□□□□ 0.38
ATP2A3Q93084 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A3Q93084 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP2A3Q93084 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC105020.1-201ENST00000435356 2205 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC093525.9-201ENST00000624961 1746 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 FLJ16779-201ENST00000612722 7638 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 KRT18P32-201ENST00000424695 1287 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC067863.1-201ENST00000494933 530 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC109635.5-201ENST00000533593 962 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC243562.1-201ENST00000560672 389 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC015911.4-201ENST00000588022 1070 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AL009183.1-201ENST00000603760 355 ntBASIC17.41■□□□□ 0.38
ATP2A3Q93084 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ATP2A3Q93084 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP2A3Q93084 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 AC011270.2-201ENST00000624293 2550 ntBASIC17.4■□□□□ 0.38
ATP2A3Q93084 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms