Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.73■□□□□ 0.43
SEMA4DQ92854 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SEMA4DQ92854 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.73■□□□□ 0.43
SEMA4DQ92854 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEMA4DQ92854 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEMA4DQ92854 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEMA4DQ92854 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.73■□□□□ 0.43
SEMA4DQ92854 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEMA4DQ92854 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SEMA4DQ92854 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SEMA4DQ92854 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 HTR5BP-201ENST00000430851 1154 ntBASIC17.72■□□□□ 0.43
SEMA4DQ92854 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 MTDHP5-201ENST00000598980 586 ntBASIC17.72■□□□□ 0.43
SEMA4DQ92854 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 LINC02199-201ENST00000506655 2702 ntBASIC17.72■□□□□ 0.43
SEMA4DQ92854 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SEMA4DQ92854 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.72■□□□□ 0.43
SEMA4DQ92854 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 TFAMP1-201ENST00000412727 736 ntBASIC17.71■□□□□ 0.43
SEMA4DQ92854 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 KRT8P48-201ENST00000515599 1220 ntBASIC17.71■□□□□ 0.43
SEMA4DQ92854 AC243562.1-201ENST00000560672 389 ntBASIC17.71■□□□□ 0.43
SEMA4DQ92854 AL135744.1-201ENST00000565098 629 ntBASIC17.71■□□□□ 0.43
SEMA4DQ92854 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.71■□□□□ 0.43
SEMA4DQ92854 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.71■□□□□ 0.43
SEMA4DQ92854 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEMA4DQ92854 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SEMA4DQ92854 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.71■□□□□ 0.42
SEMA4DQ92854 PCDHA1-201ENST00000378133 2726 ntBASIC17.71■□□□□ 0.42
SEMA4DQ92854 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEMA4DQ92854 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEMA4DQ92854 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEMA4DQ92854 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SEMA4DQ92854 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEMA4DQ92854 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEMA4DQ92854 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms