Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
DDX1Q92499 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX1Q92499 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 AC063926.2-201ENST00000623766 1308 ntBASIC17.55■□□□□ 0.4
DDX1Q92499 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX1Q92499 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX1Q92499 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX1Q92499 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX1Q92499 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX1Q92499 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.55■□□□□ 0.4
DDX1Q92499 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX1Q92499 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DDX1Q92499 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX1Q92499 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.55■□□□□ 0.4
DDX1Q92499 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX1Q92499 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX1Q92499 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.55■□□□□ 0.4
DDX1Q92499 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX1Q92499 AC092865.6-201ENST00000642101 219 ntBASIC17.55■□□□□ 0.4
DDX1Q92499 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX1Q92499 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX1Q92499 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
DDX1Q92499 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDX1Q92499 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 AL592424.1-201ENST00000563624 1536 ntBASIC17.54■□□□□ 0.4
DDX1Q92499 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX1Q92499 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 PDPK2P-202ENST00000562415 1191 ntBASIC17.54■□□□□ 0.4
DDX1Q92499 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX1Q92499 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 AL603832.2-201ENST00000566195 2125 ntBASIC17.54■□□□□ 0.4
DDX1Q92499 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX1Q92499 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX1Q92499 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX1Q92499 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX1Q92499 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX1Q92499 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
DDX1Q92499 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX1Q92499 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
DDX1Q92499 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DDX1Q92499 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 AL365203.3-201ENST00000609742 2057 ntBASIC17.53■□□□□ 0.4
DDX1Q92499 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX1Q92499 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX1Q92499 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.53■□□□□ 0.4
DDX1Q92499 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX1Q92499 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX1Q92499 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX1Q92499 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX1Q92499 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms