Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 AP001005.1-201ENST00000571755 1248 ntBASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 AC104692.2-201ENST00000603054 253 ntBASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP1Q8TDR0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 GPAA1P2-202ENST00000606848 1787 ntBASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 TPM4P1-201ENST00000436100 807 ntBASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 PRSS29P-201ENST00000440800 595 ntBASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CXCL1P1-201ENST00000502804 216 ntBASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 AL662844.1-201ENST00000546340 181 ntBASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 OR7E47P-204ENST00000575924 449 ntBASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP1Q8TDR0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 PCGF3-213ENST00000620529 1899 ntBASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 AC116407.3-201ENST00000623905 1129 ntBASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAF3IP1Q8TDR0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms