Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CHD5Q8TDI0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 MRPS18AP1-201ENST00000414458 589 ntBASIC16.53■□□□□ 0.24
CHD5Q8TDI0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 AC100757.3-201ENST00000622361 1406 ntBASIC16.53■□□□□ 0.24
CHD5Q8TDI0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHD5Q8TDI0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 MIR648-201ENST00000385046 94 ntBASIC16.52■□□□□ 0.24
CHD5Q8TDI0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 TEX28P1-201ENST00000613479 1221 ntBASIC16.52■□□□□ 0.24
CHD5Q8TDI0 TEX28P2-201ENST00000617764 1221 ntBASIC16.52■□□□□ 0.24
CHD5Q8TDI0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHD5Q8TDI0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHD5Q8TDI0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 FAM86GP-201ENST00000448322 971 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AC097493.3-201ENST00000509725 367 ntBASIC16.51■□□□□ 0.23
CHD5Q8TDI0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.51■□□□□ 0.23
CHD5Q8TDI0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms