Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AC104109.2-201ENST00000602919 1418 ntBASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AC023141.13-201ENST00000604991 943 ntBASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PCGF3-213ENST00000620529 1899 ntBASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
TTC9CQ8N5M4 CYP2T1P-202ENST00000641596 2535 ntBASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 RNU1-129P-201ENST00000384064 167 ntBASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 POU5F1P6-201ENST00000466990 990 ntBASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 AC034105.1-201ENST00000563488 319 ntBASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 U1.21-201ENST00000580816 167 ntBASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 AC010507.1-201ENST00000633895 436 ntBASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 IL9RP2-201ENST00000423948 1312 ntBASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TTC9CQ8N5M4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TTC9CQ8N5M4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms