Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 HLA-H-201ENST00000383620 1096 ntBASIC16.8■□□□□ 0.28
CHPFQ8IZ52 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.8■□□□□ 0.28
CHPFQ8IZ52 AC013467.2-201ENST00000605472 835 ntBASIC16.8■□□□□ 0.28
CHPFQ8IZ52 AC073592.8-201ENST00000624126 511 ntBASIC16.8■□□□□ 0.28
CHPFQ8IZ52 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHPFQ8IZ52 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.79■□□□□ 0.28
CHPFQ8IZ52 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 MIR661-201ENST00000384842 89 ntBASIC16.79■□□□□ 0.28
CHPFQ8IZ52 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 FAM207CP-201ENST00000443486 507 ntBASIC16.79■□□□□ 0.28
CHPFQ8IZ52 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 LINC02560-201ENST00000596379 459 ntBASIC16.79■□□□□ 0.28
CHPFQ8IZ52 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHPFQ8IZ52 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 AC007967.4-201ENST00000614700 386 ntBASIC16.78■□□□□ 0.28
CHPFQ8IZ52 AC008761.3-201ENST00000624803 892 ntBASIC16.78■□□□□ 0.28
CHPFQ8IZ52 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 AC073439.1-201ENST00000624121 1774 ntBASIC16.78■□□□□ 0.28
CHPFQ8IZ52 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CHPFQ8IZ52 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms