Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC116Q8IYX3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 PMS2P4-201ENST00000412466 1052 ntBASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 MTATP6P19-201ENST00000413797 659 ntBASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 LINC01144-201ENST00000626198 1710 ntBASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC116Q8IYX3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CCDC116Q8IYX3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms