Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 BX842568.4-201ENST00000421222 227 ntBASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB11FIP4Q86YS3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 PMS2P4-201ENST00000412466 1052 ntBASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 AC109635.5-201ENST00000533593 962 ntBASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 AC021097.1-201ENST00000607902 574 ntBASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RAB11FIP4Q86YS3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms