Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LDB1Q86U70 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LDB1Q86U70 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.51■□□□□ 0.23
LDB1Q86U70 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LDB1Q86U70 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.51■□□□□ 0.23
LDB1Q86U70 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 REXO1L8P-201ENST00000604378 1897 ntBASIC16.5■□□□□ 0.23
LDB1Q86U70 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 AC092919.2-201ENST00000623631 1645 ntBASIC16.5■□□□□ 0.23
LDB1Q86U70 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.5■□□□□ 0.23
LDB1Q86U70 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 AL513190.1-201ENST00000621254 727 ntBASIC16.5■□□□□ 0.23
LDB1Q86U70 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.5■□□□□ 0.23
LDB1Q86U70 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LDB1Q86U70 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LDB1Q86U70 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.49■□□□□ 0.23
LDB1Q86U70 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.49■□□□□ 0.23
LDB1Q86U70 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.49■□□□□ 0.23
LDB1Q86U70 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 KRT19P2-202ENST00000557173 1012 ntBASIC16.49■□□□□ 0.23
LDB1Q86U70 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LDB1Q86U70 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LDB1Q86U70 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.49■□□□□ 0.23
LDB1Q86U70 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LDB1Q86U70 ZNF259P1-201ENST00000407656 1365 ntBASIC16.49■□□□□ 0.23
LDB1Q86U70 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms