Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 PCDHA12-202ENST00000613593 2588 ntBASIC15.85■□□□□ 0.13
RNF44Q7L0R7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 AD000864.1-201ENST00000624076 2295 ntBASIC15.85■□□□□ 0.13
RNF44Q7L0R7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 GPAA1P2-202ENST00000606848 1787 ntBASIC15.85■□□□□ 0.13
RNF44Q7L0R7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF44Q7L0R7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 SPCS2P4-201ENST00000436160 681 ntBASIC15.84■□□□□ 0.13
RNF44Q7L0R7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 AC004835.2-201ENST00000603762 682 ntBASIC15.84■□□□□ 0.13
RNF44Q7L0R7 AC020765.3-201ENST00000613051 740 ntBASIC15.84■□□□□ 0.13
RNF44Q7L0R7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF44Q7L0R7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RNF44Q7L0R7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.83■□□□□ 0.12
RNF44Q7L0R7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF44Q7L0R7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms