Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 IGHGP-201ENST00000390555 1178 ntBASIC14.49□□□□□ -0.09
C11orf88Q6PI97 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 RNF126P1-202ENST00000569893 925 ntBASIC14.49□□□□□ -0.09
C11orf88Q6PI97 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 AC005332.3-201ENST00000589904 676 ntBASIC14.49□□□□□ -0.09
C11orf88Q6PI97 AL390719.2-201ENST00000606993 987 ntBASIC14.49□□□□□ -0.09
C11orf88Q6PI97 IGHV3-41-201ENST00000613121 348 ntBASIC14.49□□□□□ -0.09
C11orf88Q6PI97 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 MYCLP1-201ENST00000372451 1075 ntBASIC14.48□□□□□ -0.09
C11orf88Q6PI97 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 LINC00265-3P-201ENST00000447588 903 ntBASIC14.48□□□□□ -0.09
C11orf88Q6PI97 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AC104819.1-201ENST00000504587 486 ntBASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AP002490.2-201ENST00000524791 560 ntBASIC14.48□□□□□ -0.09
C11orf88Q6PI97 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 TPSP2-201ENST00000561760 610 ntBASIC14.48□□□□□ -0.09
C11orf88Q6PI97 RN7SL510P-201ENST00000581311 263 ntBASIC14.48□□□□□ -0.09
C11orf88Q6PI97 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C11orf88Q6PI97 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms