Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 FER1L4-210ENST00000615531 5998 ntBASIC19.74■□□□□ 0.75
RNF20Q5VTR2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 BCAR1-209ENST00000546196 1340 ntBASIC19.74■□□□□ 0.75
RNF20Q5VTR2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RNF20Q5VTR2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AC007967.2-201ENST00000432613 625 ntBASIC19.73■□□□□ 0.75
RNF20Q5VTR2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AL009183.1-201ENST00000603760 355 ntBASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AC004877.2-201ENST00000623941 599 ntBASIC19.73■□□□□ 0.75
RNF20Q5VTR2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AC025580.3-201ENST00000617932 1424 ntBASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AC006449.6-201ENST00000612330 2296 ntBASIC19.73■□□□□ 0.75
RNF20Q5VTR2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF20Q5VTR2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.72■□□□□ 0.75
RNF20Q5VTR2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RNF20Q5VTR2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms