Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC069120.2-201ENST00000524091 540 ntBASIC18.91■□□□□ 0.62
USH1GQ495M9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.91■□□□□ 0.62
USH1GQ495M9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.91■□□□□ 0.62
USH1GQ495M9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.91■□□□□ 0.62
USH1GQ495M9 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
USH1GQ495M9 AL390754.1-201ENST00000619088 582 ntBASIC18.91■□□□□ 0.62
USH1GQ495M9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USH1GQ495M9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USH1GQ495M9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 AC079328.2-201ENST00000561241 3354 ntBASIC18.91■□□□□ 0.62
USH1GQ495M9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
USH1GQ495M9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
USH1GQ495M9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1GQ495M9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
USH1GQ495M9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1GQ495M9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1GQ495M9 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USH1GQ495M9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
USH1GQ495M9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.9■□□□□ 0.62
USH1GQ495M9 AC093724.1-201ENST00000448659 1027 ntBASIC18.9■□□□□ 0.62
USH1GQ495M9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.9■□□□□ 0.62
USH1GQ495M9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.9■□□□□ 0.62
USH1GQ495M9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1GQ495M9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.9■□□□□ 0.62
USH1GQ495M9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.9■□□□□ 0.62
USH1GQ495M9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.9■□□□□ 0.62
USH1GQ495M9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.9■□□□□ 0.62
USH1GQ495M9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.9■□□□□ 0.62
USH1GQ495M9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 PCGF3-213ENST00000620529 1899 ntBASIC18.9■□□□□ 0.62
USH1GQ495M9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USH1GQ495M9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
USH1GQ495M9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1GQ495M9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.89■□□□□ 0.62
USH1GQ495M9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USH1GQ495M9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
USH1GQ495M9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.89■□□□□ 0.61
USH1GQ495M9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.89■□□□□ 0.61
USH1GQ495M9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.89■□□□□ 0.61
USH1GQ495M9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.89■□□□□ 0.61
USH1GQ495M9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
USH1GQ495M9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USH1GQ495M9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.89■□□□□ 0.61
USH1GQ495M9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.89■□□□□ 0.61
USH1GQ495M9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
USH1GQ495M9 AC098859.1-201ENST00000502915 1238 ntBASIC18.89■□□□□ 0.61
USH1GQ495M9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.89■□□□□ 0.61
USH1GQ495M9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.89■□□□□ 0.61
USH1GQ495M9 AC092364.2-202ENST00000597012 1073 ntBASIC18.89■□□□□ 0.61
USH1GQ495M9 AL096865.1-201ENST00000606796 927 ntBASIC18.89■□□□□ 0.61
USH1GQ495M9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.89■□□□□ 0.61
USH1GQ495M9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.89■□□□□ 0.61
USH1GQ495M9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.89■□□□□ 0.61
USH1GQ495M9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.89■□□□□ 0.61
USH1GQ495M9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
USH1GQ495M9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.89■□□□□ 0.61
USH1GQ495M9 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1GQ495M9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.88■□□□□ 0.61
USH1GQ495M9 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.88■□□□□ 0.61
USH1GQ495M9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
USH1GQ495M9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
USH1GQ495M9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USH1GQ495M9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.88■□□□□ 0.61
USH1GQ495M9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USH1GQ495M9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USH1GQ495M9 FAM220BP-201ENST00000377689 816 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms