Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.12■□□□□ 0.65
SHROOM1Q2M3G4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 AC005622.1-201ENST00000636801 1703 ntBASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 AC009053.2-201ENST00000563701 2365 ntBASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 LETM1P2-201ENST00000597330 2178 ntBASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 AC244107.1-201ENST00000442033 332 ntBASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 HLA-J-202ENST00000469281 1241 ntBASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 AL136982.4-201ENST00000437689 1740 ntBASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SHROOM1Q2M3G4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 GK-202ENST00000378941 458 ntTSL 3 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 DGCR5-201ENST00000399539 862 ntBASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 RN7SL618P-201ENST00000477850 296 ntBASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 TP53TG3HP-202ENST00000569755 579 ntBASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SHROOM1Q2M3G4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 SPDYE19P-201ENST00000338590 713 ntBASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.09■□□□□ 0.65
SHROOM1Q2M3G4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms