Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC117500.6-201ENST00000624871 588 ntBASIC15.96■□□□□ 0.15
HMGCS1Q01581 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGCS1Q01581 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HMGCS1Q01581 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
HMGCS1Q01581 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HMGCS1Q01581 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGCS1Q01581 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
HMGCS1Q01581 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
HMGCS1Q01581 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGCS1Q01581 AC024909.3-201ENST00000611513 2257 ntBASIC15.96■□□□□ 0.14
HMGCS1Q01581 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
HMGCS1Q01581 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 AC010491.1-201ENST00000563101 2797 ntBASIC15.95■□□□□ 0.14
HMGCS1Q01581 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 LINC01144-201ENST00000626198 1710 ntBASIC15.95■□□□□ 0.14
HMGCS1Q01581 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 RPS2P28-201ENST00000314255 741 ntBASIC15.95■□□□□ 0.14
HMGCS1Q01581 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 AC092910.1-201ENST00000482027 1129 ntBASIC15.95■□□□□ 0.14
HMGCS1Q01581 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 AL049840.3-201ENST00000602669 611 ntBASIC15.95■□□□□ 0.14
HMGCS1Q01581 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 PGM5P2-202ENST00000637225 1043 ntBASIC15.95■□□□□ 0.14
HMGCS1Q01581 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGCS1Q01581 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGCS1Q01581 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 AC012569.1-201ENST00000591191 1524 ntBASIC15.94■□□□□ 0.14
HMGCS1Q01581 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGCS1Q01581 ACTL9-202ENST00000612068 1252 ntBASIC15.94■□□□□ 0.14
HMGCS1Q01581 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGCS1Q01581 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms