Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CL1P78423 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CL1P78423 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CX3CL1P78423 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CL1P78423 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CX3CL1P78423 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CL1P78423 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CX3CL1P78423 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CL1P78423 IL9RP2-201ENST00000423948 1312 ntBASIC13.37□□□□□ -0.27
CX3CL1P78423 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CX3CL1P78423 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.37□□□□□ -0.27
CX3CL1P78423 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CX3CL1P78423 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
CX3CL1P78423 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.36□□□□□ -0.27
CX3CL1P78423 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 AL353732.1-201ENST00000569618 1459 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 AC131009.4-201ENST00000624048 1740 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 FAM185BP-201ENST00000443595 716 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 RPL13AP23-201ENST00000480739 586 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.36□□□□□ -0.27
CX3CL1P78423 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.36□□□□□ -0.27
CX3CL1P78423 AC145285.3-201ENST00000564603 959 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.36□□□□□ -0.27
CX3CL1P78423 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.36□□□□□ -0.27
CX3CL1P78423 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 AC013467.2-201ENST00000605472 835 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.36□□□□□ -0.27
CX3CL1P78423 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.36□□□□□ -0.27
CX3CL1P78423 AC005052.1-201ENST00000625181 2492 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 AC132872.4-202ENST00000622924 2756 ntBASIC13.36□□□□□ -0.27
CX3CL1P78423 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.36□□□□□ -0.27
CX3CL1P78423 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
CX3CL1P78423 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.36□□□□□ -0.27
CX3CL1P78423 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.36□□□□□ -0.27
CX3CL1P78423 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CX3CL1P78423 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.35□□□□□ -0.27
CX3CL1P78423 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CX3CL1P78423 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CX3CL1P78423 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.35□□□□□ -0.27
CX3CL1P78423 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.35□□□□□ -0.27
CX3CL1P78423 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.35□□□□□ -0.27
CX3CL1P78423 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CX3CL1P78423 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.35□□□□□ -0.27
CX3CL1P78423 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.35□□□□□ -0.27
CX3CL1P78423 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.35□□□□□ -0.27
CX3CL1P78423 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CX3CL1P78423 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms