Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLRN1P58418 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.79□□□□□ -0.04
CLRN1P58418 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLRN1P58418 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.79□□□□□ -0.04
CLRN1P58418 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.79□□□□□ -0.04
CLRN1P58418 PCGF3-213ENST00000620529 1899 ntBASIC14.79□□□□□ -0.04
CLRN1P58418 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.79□□□□□ -0.04
CLRN1P58418 AC007064.4-201ENST00000637740 555 ntBASIC14.79□□□□□ -0.04
CLRN1P58418 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CLRN1P58418 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLRN1P58418 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLRN1P58418 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLRN1P58418 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLRN1P58418 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.78□□□□□ -0.04
CLRN1P58418 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 AC007326.2-201ENST00000624224 7579 ntBASIC14.78□□□□□ -0.04
CLRN1P58418 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 IGLL3P-201ENST00000412472 434 ntBASIC14.78□□□□□ -0.04
CLRN1P58418 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.78□□□□□ -0.04
CLRN1P58418 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 RPL13AP23-201ENST00000480739 586 ntBASIC14.78□□□□□ -0.04
CLRN1P58418 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 AC096734.2-201ENST00000562054 433 ntBASIC14.78□□□□□ -0.04
CLRN1P58418 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 AC020765.3-201ENST00000613051 740 ntBASIC14.78□□□□□ -0.04
CLRN1P58418 AC010507.1-201ENST00000633895 436 ntBASIC14.78□□□□□ -0.04
CLRN1P58418 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.78□□□□□ -0.04
CLRN1P58418 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CLRN1P58418 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLRN1P58418 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLRN1P58418 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CLRN1P58418 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CLRN1P58418 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.77□□□□□ -0.04
CLRN1P58418 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.77□□□□□ -0.04
CLRN1P58418 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CLRN1P58418 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.77□□□□□ -0.04
CLRN1P58418 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.77□□□□□ -0.04
CLRN1P58418 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CLRN1P58418 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLRN1P58418 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.77□□□□□ -0.04
CLRN1P58418 IL9RP2-201ENST00000423948 1312 ntBASIC14.77□□□□□ -0.04
CLRN1P58418 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CLRN1P58418 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.77□□□□□ -0.05
CLRN1P58418 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLRN1P58418 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CLRN1P58418 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.77□□□□□ -0.05
CLRN1P58418 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.77□□□□□ -0.05
CLRN1P58418 AL590627.1-203ENST00000421194 1026 ntBASIC14.77□□□□□ -0.05
CLRN1P58418 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.77□□□□□ -0.05
CLRN1P58418 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
CLRN1P58418 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.77□□□□□ -0.05
CLRN1P58418 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.77□□□□□ -0.05
CLRN1P58418 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.77□□□□□ -0.05
CLRN1P58418 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CLRN1P58418 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.77□□□□□ -0.05
CLRN1P58418 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.77□□□□□ -0.05
CLRN1P58418 AC023141.13-201ENST00000604991 943 ntBASIC14.77□□□□□ -0.05
CLRN1P58418 AL031055.1-201ENST00000606362 631 ntBASIC14.77□□□□□ -0.05
CLRN1P58418 AC021097.1-201ENST00000607902 574 ntBASIC14.77□□□□□ -0.05
CLRN1P58418 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.77□□□□□ -0.05
CLRN1P58418 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.77□□□□□ -0.05
CLRN1P58418 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CLRN1P58418 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLRN1P58418 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLRN1P58418 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLRN1P58418 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLRN1P58418 PCDH8P1-201ENST00000428983 2773 ntBASIC14.77□□□□□ -0.05
CLRN1P58418 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLRN1P58418 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms