Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VSX2P58304 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.83■□□□□ 0.13
VSX2P58304 AC006538.1-201ENST00000567905 1585 ntBASIC15.83■□□□□ 0.13
VSX2P58304 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VSX2P58304 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VSX2P58304 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.83■□□□□ 0.13
VSX2P58304 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.83■□□□□ 0.12
VSX2P58304 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 IGHV3-62-201ENST00000520057 340 ntBASIC15.83■□□□□ 0.12
VSX2P58304 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.83■□□□□ 0.12
VSX2P58304 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VSX2P58304 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.83■□□□□ 0.12
VSX2P58304 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.83■□□□□ 0.12
VSX2P58304 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 SPCS2P4-201ENST00000436160 681 ntBASIC15.82■□□□□ 0.12
VSX2P58304 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.82■□□□□ 0.12
VSX2P58304 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.82■□□□□ 0.12
VSX2P58304 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 AC027612.4-201ENST00000605371 583 ntBASIC15.82■□□□□ 0.12
VSX2P58304 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.82■□□□□ 0.12
VSX2P58304 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.82■□□□□ 0.12
VSX2P58304 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.82■□□□□ 0.12
VSX2P58304 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.82■□□□□ 0.12
VSX2P58304 AL031731.1-201ENST00000642131 2094 ntBASIC15.82■□□□□ 0.12
VSX2P58304 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 AL118508.1-201ENST00000613502 2345 ntBASIC15.82■□□□□ 0.12
VSX2P58304 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VSX2P58304 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VSX2P58304 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
VSX2P58304 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
VSX2P58304 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
VSX2P58304 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VSX2P58304 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.81■□□□□ 0.12
VSX2P58304 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms