Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NCKAP1LP55160 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NCKAP1LP55160 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NCKAP1LP55160 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NCKAP1LP55160 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCKAP1LP55160 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NCKAP1LP55160 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCKAP1LP55160 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.02■□□□□ 0.47
NCKAP1LP55160 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NCKAP1LP55160 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 FAM220BP-201ENST00000377689 816 ntBASIC18.01■□□□□ 0.47
NCKAP1LP55160 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.01■□□□□ 0.47
NCKAP1LP55160 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NCKAP1LP55160 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCKAP1LP55160 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18■□□□□ 0.47
NCKAP1LP55160 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
NCKAP1LP55160 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKAP1LP55160 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18■□□□□ 0.47
NCKAP1LP55160 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKAP1LP55160 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18■□□□□ 0.47
NCKAP1LP55160 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18■□□□□ 0.47
NCKAP1LP55160 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NCKAP1LP55160 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NCKAP1LP55160 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
NCKAP1LP55160 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
NCKAP1LP55160 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NCKAP1LP55160 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18■□□□□ 0.47
NCKAP1LP55160 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18■□□□□ 0.47
NCKAP1LP55160 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18■□□□□ 0.47
NCKAP1LP55160 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18■□□□□ 0.47
NCKAP1LP55160 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18■□□□□ 0.47
NCKAP1LP55160 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms