Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.27■□□□□ 0.2
GTF2A1P52655 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
GTF2A1P52655 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GTF2A1P52655 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GTF2A1P52655 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GTF2A1P52655 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.27■□□□□ 0.19
GTF2A1P52655 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GTF2A1P52655 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GTF2A1P52655 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.27■□□□□ 0.19
GTF2A1P52655 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
GTF2A1P52655 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
GTF2A1P52655 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
GTF2A1P52655 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
GTF2A1P52655 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GTF2A1P52655 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GTF2A1P52655 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GTF2A1P52655 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
GTF2A1P52655 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.26■□□□□ 0.19
GTF2A1P52655 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
GTF2A1P52655 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.26■□□□□ 0.19
GTF2A1P52655 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.26■□□□□ 0.19
GTF2A1P52655 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GTF2A1P52655 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GTF2A1P52655 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
GTF2A1P52655 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
GTF2A1P52655 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GTF2A1P52655 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GTF2A1P52655 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GTF2A1P52655 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
GTF2A1P52655 KRT17P3-201ENST00000420566 1262 ntBASIC16.25■□□□□ 0.19
GTF2A1P52655 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
GTF2A1P52655 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
GTF2A1P52655 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
GTF2A1P52655 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.25■□□□□ 0.19
GTF2A1P52655 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GTF2A1P52655 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.24■□□□□ 0.19
GTF2A1P52655 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GTF2A1P52655 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GTF2A1P52655 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GTF2A1P52655 AL109659.2-201ENST00000606809 1674 ntBASIC16.24■□□□□ 0.19
GTF2A1P52655 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GTF2A1P52655 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.24■□□□□ 0.19
GTF2A1P52655 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.24■□□□□ 0.19
GTF2A1P52655 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GTF2A1P52655 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GTF2A1P52655 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms