Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 IGHV3-72-202ENST00000621503 303 ntBASIC18.16■□□□□ 0.5
CPT1AP50416 AC004461.2-201ENST00000629517 803 ntBASIC18.16■□□□□ 0.5
CPT1AP50416 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.16■□□□□ 0.5
CPT1AP50416 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CPT1AP50416 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.16■□□□□ 0.5
CPT1AP50416 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CPT1AP50416 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CPT1AP50416 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.16■□□□□ 0.5
CPT1AP50416 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.15■□□□□ 0.5
CPT1AP50416 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CPT1AP50416 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CPT1AP50416 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.15■□□□□ 0.5
CPT1AP50416 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CPT1AP50416 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.15■□□□□ 0.5
CPT1AP50416 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CPT1AP50416 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 AL109936.8-201ENST00000641772 604 ntBASIC18.15■□□□□ 0.5
CPT1AP50416 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CPT1AP50416 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CPT1AP50416 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CPT1AP50416 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPT1AP50416 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CPT1AP50416 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.14■□□□□ 0.5
CPT1AP50416 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.14■□□□□ 0.5
CPT1AP50416 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CPT1AP50416 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 PCGF3-213ENST00000620529 1899 ntBASIC18.14■□□□□ 0.49
CPT1AP50416 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPT1AP50416 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
CPT1AP50416 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CPT1AP50416 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.14■□□□□ 0.49
CPT1AP50416 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 IGHV3-71-201ENST00000523324 359 ntBASIC18.14■□□□□ 0.49
CPT1AP50416 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.14■□□□□ 0.49
CPT1AP50416 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CPT1AP50416 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.14■□□□□ 0.49
CPT1AP50416 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.14■□□□□ 0.49
CPT1AP50416 WASH4P-201ENST00000564273 1246 ntBASIC18.14■□□□□ 0.49
CPT1AP50416 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.14■□□□□ 0.49
CPT1AP50416 AC099568.2-201ENST00000609194 695 ntBASIC18.14■□□□□ 0.49
CPT1AP50416 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CPT1AP50416 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.14■□□□□ 0.49
CPT1AP50416 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.14■□□□□ 0.49
CPT1AP50416 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPT1AP50416 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPT1AP50416 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CPT1AP50416 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPT1AP50416 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.13■□□□□ 0.49
CPT1AP50416 AC060834.1-201ENST00000443027 2032 ntBASIC18.13■□□□□ 0.49
CPT1AP50416 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms