Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 PCDHB19P-201ENST00000570871 2371 ntBASIC10.54□□□□□ -0.72
UBE2AP49459 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC10.54□□□□□ -0.72
UBE2AP49459 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC10.54□□□□□ -0.72
UBE2AP49459 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 AGGF1P2-201ENST00000426656 2106 ntBASIC10.54□□□□□ -0.72
UBE2AP49459 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UBE2AP49459 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UBE2AP49459 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
UBE2AP49459 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10.53□□□□□ -0.72
UBE2AP49459 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC10.53□□□□□ -0.72
UBE2AP49459 KRT18P31-201ENST00000506277 1292 ntBASIC10.53□□□□□ -0.72
UBE2AP49459 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC10.53□□□□□ -0.72
UBE2AP49459 CYB561-217ENST00000582997 877 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2AP49459 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2AP49459 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.53□□□□□ -0.72
UBE2AP49459 AC008608.2-201ENST00000606089 416 ntBASIC10.53□□□□□ -0.72
UBE2AP49459 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UBE2AP49459 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2AP49459 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2AP49459 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2AP49459 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2AP49459 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2AP49459 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
UBE2AP49459 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2AP49459 AC004817.3-201ENST00000602957 2129 ntBASIC10.52□□□□□ -0.72
UBE2AP49459 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2AP49459 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2AP49459 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2AP49459 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2AP49459 AL603756.1-201ENST00000606511 2163 ntBASIC10.52□□□□□ -0.72
UBE2AP49459 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2AP49459 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms