Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS4P35443 NFIC-211ENST00000641145 8399 ntBASIC14.56□□□□□ -0.08
THBS4P35443 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS4P35443 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
THBS4P35443 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
THBS4P35443 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
THBS4P35443 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS4P35443 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.56□□□□□ -0.08
THBS4P35443 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 AC055717.3-201ENST00000622967 595 ntBASIC14.56□□□□□ -0.08
THBS4P35443 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
THBS4P35443 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS4P35443 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 TOP3BP1-201ENST00000420768 1380 ntBASIC14.56□□□□□ -0.08
THBS4P35443 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.56□□□□□ -0.08
THBS4P35443 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.56□□□□□ -0.08
THBS4P35443 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
THBS4P35443 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
THBS4P35443 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS4P35443 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
THBS4P35443 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
THBS4P35443 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
THBS4P35443 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS4P35443 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS4P35443 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS4P35443 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.55□□□□□ -0.08
THBS4P35443 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS4P35443 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS4P35443 AC005829.1-201ENST00000570002 483 ntBASIC14.55□□□□□ -0.08
THBS4P35443 AL078644.1-201ENST00000609881 752 ntBASIC14.55□□□□□ -0.08
THBS4P35443 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.55□□□□□ -0.08
THBS4P35443 C20orf181-201ENST00000623918 480 ntBASIC14.55□□□□□ -0.08
THBS4P35443 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS4P35443 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.55□□□□□ -0.08
THBS4P35443 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.55□□□□□ -0.08
THBS4P35443 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.55□□□□□ -0.08
THBS4P35443 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
THBS4P35443 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
THBS4P35443 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 ALOX12P2-203ENST00000570921 1945 ntBASIC14.54□□□□□ -0.08
THBS4P35443 ME2P1-201ENST00000426028 1970 ntBASIC14.54□□□□□ -0.08
THBS4P35443 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.54□□□□□ -0.08
THBS4P35443 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
THBS4P35443 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
THBS4P35443 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms