Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC063926.3-201ENST00000624734 5658 ntBASIC17.51■□□□□ 0.39
CTNNA1P35221 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNNA1P35221 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.51■□□□□ 0.39
CTNNA1P35221 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.51■□□□□ 0.39
CTNNA1P35221 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTNNA1P35221 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTNNA1P35221 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTNNA1P35221 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTNNA1P35221 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNNA1P35221 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNNA1P35221 AC104640.1-201ENST00000562617 2109 ntBASIC17.5■□□□□ 0.39
CTNNA1P35221 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTNNA1P35221 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.5■□□□□ 0.39
CTNNA1P35221 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNNA1P35221 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.5■□□□□ 0.39
CTNNA1P35221 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.5■□□□□ 0.39
CTNNA1P35221 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.5■□□□□ 0.39
CTNNA1P35221 UPK3BP1-201ENST00000428678 509 ntBASIC17.5■□□□□ 0.39
CTNNA1P35221 HCG4P8-203ENST00000443049 980 ntBASIC17.5■□□□□ 0.39
CTNNA1P35221 SCARNA2-201ENST00000458748 420 ntBASIC17.5■□□□□ 0.39
CTNNA1P35221 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CTNNA1P35221 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.5■□□□□ 0.39
CTNNA1P35221 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNNA1P35221 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNNA1P35221 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CTNNA1P35221 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 AC092384.3-202ENST00000564646 2873 ntBASIC17.5■□□□□ 0.39
CTNNA1P35221 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CTNNA1P35221 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTNNA1P35221 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.5■□□□□ 0.39
CTNNA1P35221 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTNNA1P35221 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNNA1P35221 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNNA1P35221 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNNA1P35221 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.49■□□□□ 0.39
CTNNA1P35221 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNNA1P35221 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 AKR1C7P-201ENST00000305623 895 ntBASIC17.49■□□□□ 0.39
CTNNA1P35221 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNNA1P35221 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNNA1P35221 PMS2P1-201ENST00000431037 1228 ntBASIC17.49■□□□□ 0.39
CTNNA1P35221 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNNA1P35221 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNNA1P35221 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTNNA1P35221 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNNA1P35221 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.49■□□□□ 0.39
CTNNA1P35221 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.49■□□□□ 0.39
CTNNA1P35221 CYP2A7P1-201ENST00000595391 815 ntBASIC17.49■□□□□ 0.39
CTNNA1P35221 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CTNNA1P35221 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.49■□□□□ 0.39
CTNNA1P35221 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CTNNA1P35221 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CTNNA1P35221 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTNNA1P35221 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms