Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
COL8A2P25067 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 TUBB3P1-201ENST00000405796 1332 ntBASIC13.95□□□□□ -0.18
COL8A2P25067 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.95□□□□□ -0.18
COL8A2P25067 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.95□□□□□ -0.18
COL8A2P25067 SPDYE14P-201ENST00000442619 822 ntBASIC13.95□□□□□ -0.18
COL8A2P25067 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.95□□□□□ -0.18
COL8A2P25067 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.95□□□□□ -0.18
COL8A2P25067 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.95□□□□□ -0.18
COL8A2P25067 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 AP002490.2-201ENST00000524791 560 ntBASIC13.95□□□□□ -0.18
COL8A2P25067 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.95□□□□□ -0.18
COL8A2P25067 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.95□□□□□ -0.18
COL8A2P25067 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.95□□□□□ -0.18
COL8A2P25067 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.95□□□□□ -0.18
COL8A2P25067 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.95□□□□□ -0.18
COL8A2P25067 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.95□□□□□ -0.18
COL8A2P25067 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
COL8A2P25067 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
COL8A2P25067 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
COL8A2P25067 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 FLJ38576-201ENST00000623820 2459 ntBASIC13.95□□□□□ -0.18
COL8A2P25067 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.95□□□□□ -0.18
COL8A2P25067 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.95□□□□□ -0.18
COL8A2P25067 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.94□□□□□ -0.18
COL8A2P25067 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.94□□□□□ -0.18
COL8A2P25067 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.94□□□□□ -0.18
COL8A2P25067 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.94□□□□□ -0.18
COL8A2P25067 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.94□□□□□ -0.18
COL8A2P25067 AC067863.1-201ENST00000494933 530 ntBASIC13.94□□□□□ -0.18
COL8A2P25067 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.94□□□□□ -0.18
COL8A2P25067 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
COL8A2P25067 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
COL8A2P25067 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
COL8A2P25067 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms