Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHMP24386 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CHMP24386 MRPL20P1-201ENST00000400819 433 ntBASIC15.5■□□□□ 0.07
CHMP24386 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.5■□□□□ 0.07
CHMP24386 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.5■□□□□ 0.07
CHMP24386 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.5■□□□□ 0.07
CHMP24386 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CHMP24386 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.5■□□□□ 0.07
CHMP24386 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.5■□□□□ 0.07
CHMP24386 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CHMP24386 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CHMP24386 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHMP24386 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.5■□□□□ 0.07
CHMP24386 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP24386 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP24386 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 PI4KAP1-204ENST00000612579 1703 ntBASIC15.49■□□□□ 0.07
CHMP24386 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 AC005052.1-201ENST00000625181 2492 ntBASIC15.49■□□□□ 0.07
CHMP24386 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CHMP24386 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CHMP24386 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 CRYGEP-201ENST00000412192 528 ntBASIC15.49■□□□□ 0.07
CHMP24386 MED15P5-201ENST00000423150 992 ntBASIC15.49■□□□□ 0.07
CHMP24386 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.49■□□□□ 0.07
CHMP24386 DUX4L17-201ENST00000557360 1267 ntBASIC15.49■□□□□ 0.07
CHMP24386 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.49■□□□□ 0.07
CHMP24386 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP24386 AC023511.2-201ENST00000618803 211 ntBASIC15.49■□□□□ 0.07
CHMP24386 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP24386 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.49■□□□□ 0.07
CHMP24386 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHMP24386 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.49■□□□□ 0.07
CHMP24386 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP24386 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CHMP24386 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP24386 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.48■□□□□ 0.07
CHMP24386 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CHMP24386 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
CHMP24386 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.48■□□□□ 0.07
CHMP24386 PAWRP1-201ENST00000451083 565 ntBASIC15.48■□□□□ 0.07
CHMP24386 HLA-J-202ENST00000469281 1241 ntBASIC15.48■□□□□ 0.07
CHMP24386 RNA5SP416-201ENST00000516838 111 ntBASIC15.48■□□□□ 0.07
CHMP24386 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHMP24386 AC140113.2-201ENST00000604370 208 ntBASIC15.48■□□□□ 0.07
CHMP24386 AC010654.1-201ENST00000615722 808 ntBASIC15.48■□□□□ 0.07
CHMP24386 AC004790.2-201ENST00000623588 572 ntBASIC15.48■□□□□ 0.07
CHMP24386 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms